The TempO-SeqR program is designed to complement and assist in the execution of the TempO-Seq assay. TempO-SeqR allows users to align and analyze TempO-Seq data within hours through a fast, secure, cloud-based platform.
TempO-SeqR enables simple Sample Sheet preparation, easily converting a simple plate map of sample names into a Sample Sheet for any of the supported Next-Generation Sequencing instruments. An intuitive interface is provided for quickly aligning FASTQ files, producing a count table, showing the signal levels (counts) for each probe in each sample.
TempO-SeqR also contains multiple software tools to check data quality, perform differential expression, and statistical analyses. It is possible to quickly check correlation of individual samples or controls to each other; to verify grouping of sample types based on similarity; to calculate PCA groupings; or to analyze the basic fold-changes in gene expression between treatment or disease groups.
- Alignment, quality control, and analysis in a single environment.
- Biologist-friendly GUI.
- No informaticist needed.
- No installation required.